Selected Publications [Google Scholar]
* denotes co-first authorship; # denotes co-corresponding authorship

State-of-the-Art Text-prompted Medical Segmentation Models Struggle to Ground Chest CT Findings
Mohammed Baharoon,
, Michael Moritz, Abhinav Kumar, Sung Eun Kim, Xiaoman Zhang, Miao Zhu, Kent Kleinschmidt, Sri Sai Dinesh Jaliparthi, Sathvik Suryadevara, Rithvik Akula, Mark Marino, Wenhui Lei, Ibrahim Ethem Hamamci, Pranav RajpurkarMachine Learning for Healthcare (MLHC), 2025

ReXplain: Translating Radiology into Patient-Friendly Video Reports
AAAI AIMedHeath, 2025

A Large Model for Non-invasive and Personalized Management of Breast Cancer from Multiparametric MRI
Nature Communications, 2025

Deep Learning in Breast Cancer Imaging: A Decade of Progress and Future Directions
IEEE Reviews in Biomedical Engineering (IEEE RBME), 2025

Learning Robust Medical Image Segmentation from Multi-source Annotations
Medical Image Analysis, 2025

Medical Image Debiasing by Learning Adaptive Agreement from a Biased Council
, Xin Huang, Minghao Wang, Zhuoyue Wan, Hao Chen
Medical Image Analysis (MedIA), 2025

Scale-aware Super-resolution Network with Dual Affinity Learning for Lesion Segmentation from Medical Images
, Yanwen Li*, Huangjing Ling, Pheng-Ann Heng, Hao Chen
IEEE Transactions on Neural Networks and Learning Systems (IEEE TNNLS), 2024

Rethinking Multiple Instance Learning for Whole Slide Image Classification: A Bag-Level Classifier is a Good Instance-Level Teacher
Hongyi Wang,
, Fang Wang, Ruofeng Tong, Yen-Wei Chen, Hongjie Hu, Lanfen Lin, Hao ChenIEEE Transactions on Medical Imaging (IEEE TMI), 2024

Deep Omni-supervised Learning for Rib Fracture Detection from Chest Radiology Images
Zhizhong Chai,
, Huangjing Ling, Pheng-Ann Heng, Hao ChenIEEE Transactions on Medical Imaging (IEEE TMI), 2024

MICA: Towards Explainable Skin Lesion Diagnosis via Multi-Level Image-Concept Alignment
Yequan Bie,
, Hao ChenAAAI Conference on Artificial Intelligence (AAAI), 2024

Development and validation of an interpretable model integrating multimodal information for improving ovarian cancer diagnosis
Huiling Xiang*, Yongjie Xiao*, Fang Li, Chunyan Li, Lixian Liu, Tingting Deng, Cuiju Yan, Fengtao Zhou, Xi Wang, Jinjing Ou, Qingguang Lin, Ruixia Hong, Lishu Huang,
, Huangjing Lin, Xi Lin, Hao ChenNature Communications, 2024

Scale Federated Learning for Label Set Mismatch in Medical Image Classification
Zhipeng Deng,
, Hao ChenInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2023

Rethinking Annotation Granularity for Overcoming Shortcuts in Deep Learning–based Radiograph Diagnosis: A Multicenter Study
, Hao Chen, Yongjie Xiao, Yanning Zhou, Xi Wang, Varut Vardhanabhuti, Mingxiang Wu, Chu Han, Zaiyi Liu, Xin Hao Benjamin Fang, Efstratios Tsougenis, Huangjing Lin, Pheng-Ann Heng
Radiology: Artificial Intelligence, 2022

Pseudo Bias-Balanced Learning for Debiased Chest X-ray Classification
International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2022

OXnet: Deep Omni-supervised Thoracic Disease Detection from Chest X-rays
, Hao Chen*, Yanning Zhou, Huangjing Lin, Pheng-Ann Heng
International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2021

Dual-Consistency Semi-Supervised Learning with Uncertainty Quantification for COVID-19 Lesion Segmentation from CT Images
Yanwen Li,
, Huangjing Lin, Hao Chen, Pheng-Ann HengInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2021

Deep Mining External Imperfect Data for Chest X-ray Disease Screening
, Lequan Yu*, Hao Chen, Quande Liu, Xi Wang, Jiaqi Xu, Pheng-Ann Heng
IEEE Transactions on Medical Imaging (IEEE TMI), 2020

Deep Angular Embedding and Feature Correlation Attention for Breast MRI Cancer Analysis
, Hao Chen, Xi Wang, Qi Dou, Huangjing Lin, Juan Zhou, Gongjie Li, Pheng-Ann Heng
Medical Image Computing and Computer Assisted Intervention (MICCAI), 2019

Weakly Supervised 3D Deep Learning for Breast Cancer Classification and Localization of the Lesions in MR Images
Juan Zhou,
, Qi Dou, Hao Chen, Cheng Chen, Gong‐Jie Li, Ze‐Fei Jiang, Pheng‐Ann HengJournal of Magnetic Resonance Imaging (JMRI), 2019

Detection of Glaucomatous Optic Neuropathy with Spectral-domain Optical Coherence Tomography: A Retrospective Training and Validation Deep-learning Analysis
An Ran Ran, Carol Y Cheung, Xi Wang, Hao Chen,
, Poemen P Chan, Mandy OM Wong, Robert T Chang, Suria S Mannil, Alvin L Young, Hon-wah Yung, Chi Pui Pang, Pheng-Ann Heng, Clement C ThamThe Lancet Digital Health, 2019